| Protein: | gi|16974529, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 229 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16974529, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
266.0 | [0..1] | [229..1] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MQSIRSSTRL LQRHRFSISN TLRFTSSSSS SGSWSENESR MVGFDSFPCT RAATYLISSL 60
61 KNVGFSSSAI PKQDFKYSLR CFSTTGDSVQ STPQGSPESD CVVPQRIK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.446 | a.118.1 | ARM repeat |
| View | Download | 0.444 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.426 | d.58.49 | YajQ-like |
| View | Download | 0.288 | a.3.1 | Cytochrome c |
| View | Download | 0.276 | a.61.1 | Retroviral matrix proteins |
|
Region A: Residues: [109-229] |
1 11 21 31 41 51
| | | | | |
1 FKRLDKTAKH IMQIVDKEAV EEVRNLREIP EIKPGYIVQL KVEVPENKRR VSIVKGVVIA 60
61 RRNAGLNSTF RIRRLVAGVG VESMFPLYSP NLREIKVVDK KKVRRAKLYY LRDKVNALKK 120
121 H
|
| Detection Method: | |
| Confidence: | 40.522879 |
| Match: | 1vs6P |
| Description: | No description for 1vs6P was found. |
| Term | Confidence | Notes |
| structural constituent of ribosome | 3.79170826245673 | bayes_pls_golite062009 |
| structural molecule activity | 3.49833752110162 | bayes_pls_golite062009 |
