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View Structure Prediction Details

Protein: gi|7340673, gi|1...
Organism: Arabidopsis thaliana
Length: 431 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7340673, gi|1....

Description E-value Query
Range
Subject
Range
gi|21536598 - gi|21536598|gb|AAM60930.1| unknown [Arabidopsis thaliana]
219.0 [0..24] [430..3]

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Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIARILAALA DSMEMPVAAG GGSVLGTIKI AVMPIAKVFT MCFLGLLMAS KYVNILPPSG  60
   61 RKLLNGLVFS LLLPCLIFSQ LGQAVTLQKM LQWWFIPVNV VLGTISGSII GFIVASIVRP 120
  121 PYPYFKFTII QIGVGNIGNV PLVLLAALCR DTSNPFGDSE KCSIDGTAYI SFGQWVGAII 180
  181 LYTYVYQMFA PPPEGFDAEE ENLAL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [206-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTLPVDAAPE QVPLLTQNFP KDFSPTQDLL PVQSTEPRGR GVSRKGKIAQ IFVFLYEKLK  60
   61 LKQIVQPAIV ASILAMILGA IPFTKKLIFT N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [297-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAPLFFFTDS CMILGDAMIP CILLALGGNL INGPGSSKLG FKTTAAIIIG RLVLVPPVGL  60
   61 GIVTVADKLG FLPADDKMFR FVLLLQHTMP TSVLSGAVAN LRGCGRESAA VLFWVHIFAI 120
  121 FSMAGWMVLY INILF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle