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View Structure Prediction Details

Protein: gi|12323420, gi|...
Organism: Arabidopsis thaliana
Length: 281 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12323420, gi|....

Description E-value Query
Range
Subject
Range
gi|215695332, gi... - gi|57899179|dbj|BAD87231.1| membrane protein-like [Oryza sativa Japonica Group], gi|222619919|gb|EEE...
396.0 [0..2] [260..5]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRTMSAWG SAILIFIILM IVTPTIPQSQ AYHNFADQRS FLGIPNFLNV ISNFPFLIIG  60
   61 LIGLILCFYP EDYFSFSLRG EKIGWTCFYI GVAAVAFGSS YYHLHPNDAT LLWDRLPMTI 120
  121 AFTSIMAIFV IERI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEHKGTYSIA PLLLAGLVSI LYWRFFDDLR PYALVQFVPC IVIPLMAILL PPMYTHSTYW  60
   61 LWAAGFYLLA KVEEAADKPI YSWTHHIISG HSLKHLCAAM VPVFLTLMLA KRTVQTERIS 120
  121 LYKTWKKGSE EERFEHSYSN VAVEETR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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