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View Structure Prediction Details

Protein: gi|15238919, gi|...
Organism: Arabidopsis thaliana
Length: 148 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15238919, gi|....

Description E-value Query
Range
Subject
Range
gi|9369367 - gi|9369367|gb|AAF87116.1|AC006434_12 F10A5.20 [Arabidopsis thaliana]
192.0 [0..1] [146..1]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGIGKCSK IRHIVKLRQM LRQWRNKARM SSVRRSVPSD VPSGHVAVYV GRSCRRFVVL  60
   61 ATYLNHPILM NLLVKAEEEF GFANQGPLVI PCEESVFEES IRFITRSSRF TCTDDLKKNR 120
  121 HGGIRSKLDL LMESRPLLHG VSEKAIIW

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.481486
Match: PF02519.5
Description: No description for PF02519.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.272 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.240 N/A N/A d.32.1 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
View Download 0.225 N/A N/A d.21.1 Diaminopimelate epimerase-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle