| Protein: | PCS1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 485 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCS1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
816.0 | [0..1] | [485..1] |
|
|
812.0 | [0..1] | [485..1] |
|
|
811.0 | [0..1] | [483..1] |
|
|
805.0 | [0..1] | [485..1] |
|
|
800.0 | [0..1] | [485..1] |
|
|
800.0 | [0..1] | [485..1] |
|
|
800.0 | [0..1] | [485..1] |
|
Region A: Residues: [1-231] |
1 11 21 31 41 51
| | | | | |
1 MAMASLYRRS LPSPPAIDFS SAEGKLIFNE ALQKGTMEGF FRLISYFQTQ SEPAYCGLAS 60
61 LSVVLNALSI DPGRKWKGPW RWFDESMLDC CEPLEVVKEK GISFGKVVCL AHCSGAKVEA 120
121 FRTSQSTIDD FRKFVVKCTS SENCHMISTY HRGVFKQTGT GHFSPIGGYN AERDMALILD 180
181 VARFKYPPHW VPLKLLWEAM DSIDQSTGKR RGFMLISRPH REPGLLYTLS C
|
| Detection Method: |  |
| Confidence: | 76.69897 |
| Match: | 2btwA |
| Description: | Crystal structure of Alr0975 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [232-372] |
1 11 21 31 41 51
| | | | | |
1 KDESWIEIAK YLKEDVPRLV SSQHVDSVEK IISVVFKSLP SNFNQFIRWV AEIRITEDSN 60
61 QNLSAEEKSR LKLKQLVLKE VHETELFKHI NKFLSTVGYE DSLTYAAAKA CCQGAEILSG 120
121 SPSKEFCCRE TCVKCIKGPD D
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.572 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.560 | N/A | N/A | a.246.2 | Description not found. |
| View | Download | 0.559 | N/A | N/A | d.92.1 | Metalloproteases ("zincins"), catalytic domain |
| View | Download | 0.526 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.515 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.515 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.458 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.453 | N/A | N/A | a.118.8 | TPR-like |
|
Region A: Residues: [373-485] |
1 11 21 31 41 51
| | | | | |
1 SEGTVVTGVV VRDGNEQKVD LLVPSTQTEC ECGPEATYPA GNDVFTALLL ALPPQTWSGI 60
61 KDQALMHEMK QLISMASLPT LLQEEVLHLR RQLQLLKRCQ ENKEEDDLAA PAY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.628 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.628 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.598 | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.487 | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.481 | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.440 | d.224.1 | SufE-like |
| View | Download | 0.423 | d.224.1 | SufE-like |
| View | Download | 0.386 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.385 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.361 | a.97.1 | An anticodon-binding domain of class I aminoacyl-tRNA synthetases |
| View | Download | 0.342 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.342 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.282 | d.224.1 | SufE-like |
| View | Download | 0.242 | a.130.1 | Chorismate mutase II |
| View | Download | 0.211 | a.159.4 | Description not found. |
