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View Structure Prediction Details

Protein: PRA1D_ARATH
Organism: Arabidopsis thaliana
Length: 182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRA1D_ARATH.

Description E-value Query
Range
Subject
Range
gi|21555645 - gi|21555645|gb|AAM63905.1| unknown [Arabidopsis thaliana]
195.0 [0..1] [182..1]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANQVITGIK ETAQSITGAA RPWGDFLDLS AFSFPSSIAD ATTRVTQNLT HFRINYSIIL  60
   61 SILLGLTLIT RPIAILAFIA VGLAWFFLYF AREEPLTIFG FTIDDGIVAV LLIGLSIGSL 120
  121 VTTGVWLRAL TTVGFGVLVL ILHAALRGTD DLVSDDLESP YGPMLSTSGG GNDGARGDYS 180
  181 GI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 64.080922
Match: PF03208.10
Description: No description for PF03208.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle