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View Structure Prediction Details

Protein: gi|17065648, gi|...
Organism: Arabidopsis thaliana
Length: 136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17065648, gi|....

Description E-value Query
Range
Subject
Range
DNAJ_PHOLL - Chaperone protein DnaJ OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 /...
DNAJ_PHOLL - Chaperone protein dnaJ OS=Photorhabdus luminescens subsp. laumondii GN=dnaJ PE=3 SV=1
138.0 [0..2] [130..66]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSLCFFSS PPTFCFQSPS KNPKPSHFFS TNDNTSSLVQ KRELLQTSRS QSFEVKAANN  60
   61 NPQGTKPNSL VCANCEGEGC VACSQCKGGG VNLIDHFNGQ FKAGALCWLC RGKKEVLCGD 120
  121 CNGAGFIGGF LSTFDE

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Detection Method: PSI-BLAST
Confidence: 22.0
Match: 1nltA
Description: The crystal structure of Hsp40 Ydj1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle