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View Structure Prediction Details

Protein: PID_ARATH
Organism: Arabidopsis thaliana
Length: 438 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PID_ARATH.

Description E-value Query
Range
Subject
Range
gi|1935918 - gi|1935918|gb|AAB54117.1| putative serine/threonine protein kinase [Brassica rapa]
315.0 [0..1] [438..1]

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Predicted Domain #1
Region A:
Residues: [1-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRESDGEMS LGTTNSPISS GTESCSSFSR LSFDAPPSTI PEEESFLSLK PHRSSDFAYA  60
   61 EIRRRKKQGL TFRDFRLMRR IGAGDIGTVY LCRLAGDEEE SRSSYFAMKV VDKEALALKK 120
  121 KMHRAEMEKT ILKMLDHPFL PTLYAEFEAS HFSCIVMEYC SGGDLHSLRH RQPHRRFSLS 180
  181 SARFYAAEVL VALEYLHMLG IIYRDLKPEN ILVRSDGHIM LSDFDLSLCS DSIAAVESSS 240
  241 SSPENQQLRS PRRFTRLARL FQRVLRSKKV QTLEPTRLFV AEPVTARSGS FVGTHEYVAP 300
  301 EVASGGSHGN AVDWWAFGVF LYEMIYGKTP FVAPTNDVIL RNIVKRQLSF PTDSPATMFE 360
  361 LHARNLISGL LNKDPTKRLG SRRGAAEVKV HPFFKGLNFA LIRTLTPPEI PSSVVKKPMK 420
  421 SATFSGRSSN KPAAFDYF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.0
Match: 2gnfA
Description: No description for 2gnfA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle