YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MGP4_ARATH
Organism: Arabidopsis thaliana
Length: 360 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MGP4_ARATH.

Description E-value Query
Range
Subject
Range
gi|2191131, gi|7... - pir||T01721 hypothetical protein A_IG002N01.8 - Arabidopsis thaliana, gi|2191131|gb|AAB61018.1| A_I...
397.0 [0..1] [360..72]

Back

Predicted Domain #1
Region A:
Residues: [1-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQQKFLHQR PIQNPFTNPF SSSPLSTSSI SNRPISLLSR NGLLLLLALL VILGVFLPWA  60
   61 GSPLFPSPNK LSPSQSKWRD YSLPQAVKFV AKNGTVIVCA VSYPYLPFLN NWLISVSRQK 120
  121 HQDQVLVIAE DYATLYKVNE KWPGHAVLIP PALDSQTAHK FGSQGFFNFT ARRPQHLLEI 180
  181 LELGYNVMYN DVDMVWLQDP FQYLEGKHDA YFMDDMTAIK PLDHSHDLPP PGKKGRTYIC 240
  241 SCMIFLRPTN GAKLLMKKWI EELETQPWSR AKKANDQPGF NWALNKTANQ VDMYLLSQAA 300
  301 FPTGGLYFKN KTWVKETKGK HAIIHNNYIV GFEKKIKRFR DFNLWLVDDH ASESPLGKLE 360
  361 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.38
Match: 1zcuA
Description: apo form of the 162S mutant of glycogenin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.2097350467072 bayes_pls_golite062009
transferase activity 0.75347715535193 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle