| Protein: | gi|15232180, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 755 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15232180, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
404.0 | [0..1] | [726..1] |
|
|
372.0 | [0..1] | [741..1] |
|
|
345.0 | [0..1] | [738..1] |
|
|
321.0 | [0..1] | [754..1] |
|
|
275.0 | [0..97] | [482..16] |
|
|
272.0 | [0..137] | [755..96] |
|
|
268.0 | [0..97] | [482..16] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MASRAIVRRK NIISDYLNVY ARSIQSFQYI GNSSQTVHSH AYHSGINRPP VETKPVTEHK 60
61 SFTRRDGLLL LSRNGYFNRS FHGF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.592 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.592 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.455 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.455 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.408 | a.4.1 | Homeodomain-like |
| View | Download | 0.405 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.398 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.398 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.384 | a.24.28 | Description not found. |
|
Region A: Residues: [85-286] |
1 11 21 31 41 51
| | | | | |
1 HSSGFGYGSS EVGPSLGMRY MSLSIRNATT VAAKKPEEED KKVDELAKNR KEASPEECDQ 60
61 AVESLSSVKA KAKAKRLQES KKVARSIVQR AWAIVLKIGP AIKAVASMNR ADWAKKLTHW 120
121 KHEFVSTLKH YWLGTKLLWA DTRISSRLLL KLAGGKSLSR RERQQLTRTT ADIFRLVPFA 180
181 VFILVPFMEF LLPVFLKLFP NM
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [287-369] |
1 11 21 31 41 51
| | | | | |
1 LPSTFQDKMK EEEALKRKLL ARIEYAKFLQ ETAREMAKEV KHSRTGEVKQ TAEDLDEFLD 60
61 KVRRGQIVHN DELLGFAKLF NDE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.910 | a.8.4 | Description not found. |
| View | Download | 0.908 | a.8.4 | Description not found. |
| View | Download | 0.847 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.839 | a.8.4 | Description not found. |
| View | Download | 0.836 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.836 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.796 | a.112.1 | Description not found. |
| View | Download | 0.778 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.729 | f.17.1 | F1F0 ATP synthase subunit C |
|
Region A: Residues: [370-755] |
1 11 21 31 41 51
| | | | | |
1 LTLDNISRPR LVSMCKYMGI SPYGTDAYLR YMLRKRLRSI KEDDKLIRAE GVDSLSEAEL 60
61 REDCRERGML GLVSVEEMRQ QLRDWMDLSL NHSVPSSLLI LSRAFTVAGR VKAEDAVRAT 120
121 LSSLPDEVVD TVGITSLPSE DPVSERRRKL EYLEMQEELI KEEEEKEEEE LTRIKDVKGG 180
181 DEDKALQEMT IPTASEAQEQ ARARVLEQQD DLCKLSRALG VLASASSVCR EREEFLRLVK 240
241 KEVEFYNTMV EREDVDGEKA AMKAYKAARV DIDQADEVAE ADEVSSALME KVDGLIQNLE 300
301 KEIDDVDIKI GKGWQLLDRD RDGKVTPDEV AAAAMYLKDT LANDGLQQLI SSLSKDKEGR 360
361 IMVEDIVRLG RLGSKPEENA TEEESS
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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