Protein: | MAG2_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 795 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAG2_ARATH.
Description | E-value | Query Range |
Subject Range |
|
501.0 | [0..1] | [795..1] |
|
420.0 | [0..50] | [792..117] |
|
420.0 | [0..38] | [792..83] |
|
417.0 | [0..21] | [792..140] |
|
413.0 | [0..35] | [792..104] |
|
412.0 | [0..21] | [792..61] |
|
407.0 | [0..38] | [792..78] |
|
406.0 | [0..159] | [792..7] |
|
402.0 | [0..13] | [793..12] |
Region A: Residues: [1-373] |
1 11 21 31 41 51 | | | | | | 1 MEAIKPLPQV SSFSASVFSF LDGRFKESTD LSHSTGLVSE LQTEISELDQ RLAGLNRQLE 60 61 SGLAAYASFS DRVGGLFFEV NAKLADLSSS TSVTRSASDS GKEEEATEHV AGEDLPSLAK 120 121 EVAQVESVRA YAETALKLDT LVGDIEDAVM SSLNKNLRTS RSSGFEEVRL HAIKTLKTTE 180 181 EILSSVAKRH PRWARLVSAV DHRVDRALAM MRPQAIADYR ALLSSLRWPP QLSTLTSASL 240 241 DSKSENVQNP LFNMEGSLKS QYCGSFHALC SLQGLQLQRK SRQLGIHKGE NVLFHQPLWA 300 301 IEELVNPLTV ASQRHFTKWS EKPEFIFALV YKITRDYVDS MDELLQPLVD EAKLAGYSCR 360 361 EEWVSAMVSS LSL |
Detection Method: | |
Confidence: | 26.0 |
Match: | 1i84S |
Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [374-434] |
1 11 21 31 41 51 | | | | | | 1 YLVKEIFPIY VGQLDEANET DLRSEAKVSW LHLIDLMISF DKRVQSLVSQ SGILSLQEDG 60 61 N |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.774 | a.7.16 | Description not found. |
View | Download | 0.669 | a.189.1 | Description not found. |
View | Download | 0.640 | a.189.1 | Description not found. |
View | Download | 0.624 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
View | Download | 0.624 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
View | Download | 0.623 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
View | Download | 0.555 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
View | Download | 0.506 | a.24.17 | Group V grass pollen allergen |
View | Download | 0.494 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
Region A: Residues: [435-795] |
1 11 21 31 41 51 | | | | | | 1 LLRISSLSVF CDRPDWLDLW AEIELDERLV KFKEEIDNDR NWTAKVQDEL ISSSNVYRPP 60 61 IISSIFLQHL SSIIERSKSV PALYLRARFL RLAASPTIHK FLDCLLLRCQ DADGLTALTE 120 121 NNDLIKVSNS INAGHYIESV LEEWSEDVFF LEMGTGQHDP QEVPGLENFT EPSEGIFGEE 180 181 FEKLEKFRLE WINKLSVVIL RGFDARIREY IKNRKQWQEK KDKEWTVSRA LVGALDYLQG 240 241 KTSIIEENLN KADFTAMWRT LASEIDKLFF NSILMANVKF TNDGVERLKV DMEVLYGVFR 300 301 TWCVRPEGFF PKLSEGLTLL KMEEKQVKDG LSRGDKWLRE NRIRYLSEAE AKKVAKSRVF 360 361 S |
Detection Method: | |
Confidence: | 1.41 |
Match: | 2fji1 |
Description: | No description for 2fji1 was found. |