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View Structure Prediction Details

Protein: PEK13_ARATH
Organism: Arabidopsis thaliana
Length: 710 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEK13_ARATH.

Description E-value Query
Range
Subject
Range
gi|125591633, gi... - gi|125591633|gb|EAZ31983.1| hypothetical protein OsJ_015466 [Oryza sativa (japonica cultivar-group)]...
358.0 [0..84] [676..327]

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Predicted Domain #1
Region A:
Residues: [1-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSPTSSPP APSADSAPPP DTSSDGSAAP PPTDSAPPPS PPADSSPPPA LPSLPPAVFS  60
   61 PPPTVSSPPP PPLDSSPPPP PDLTPPPSSP PPPDAPPPIP IVFPPPIDSP PPESTNSPPP 120
  121 PEVFEPPPPP ADEDESPPAP PPPEQLPPPA SSPQGGPKKP KKHHPGPATS PPAPSAPATS 180
  181 PPAPPNAPPR NSSHALPPKS TAAGGPLTSP SRGVPSSGNS VPPPANSGGG YQGKTMAGFA 240
  241 IAGFAVIALM AVVFLVRRKK KRNIDAYSDS QYLPPSNFSI KSDGFLYGQN PTKGYSGP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [299-710]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGYNSQQQSN SGNSFGSQRG GGGYTRSGSA PDSAVMGSGQ THFTYEELTD ITEGFSKHNI  60
   61 LGEGGFGCVY KGKLNDGKLV AVKQLKVGSG QGDREFKAEV EIISRVHHRH LVSLVGYCIA 120
  121 DSERLLIYEY VPNQTLEHHL HGKGRPVLEW ARRVRIAIGS AKGLAYLHED CHPKIIHRDI 180
  181 KSANILLDDE FEAQVADFGL AKLNDSTQTH VSTRVMGTFG YLAPEYAQSG KLTDRSDVFS 240
  241 FGVVLLELIT GRKPVDQYQP LGEESLVEWA RPLLHKAIET GDFSELVDRR LEKHYVENEV 300
  301 FRMIETAAAC VRHSGPKRPR MVQVVRALDS EGDMGDISNG NKVGQSSAYD SGQYNNDTMK 360
  361 FRKMAFGFDD SSDSGMYSGD YSVQDSRKGS NGASSEFTRN ETENRNFNNR RY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.39794
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle