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View Structure Prediction Details

Protein: gi|6522532, gi|1...
Organism: Arabidopsis thaliana
Length: 234 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6522532, gi|1....

Description E-value Query
Range
Subject
Range
gi|42572595 - gi|42572595|ref|NP_974393.1| HNH endonuclease domain-containing protein [Arabidopsis thaliana]
243.0 [0..1] [166..1]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWPTTTLIS RRICNLLIFF VKLNHKNLSI DSDNPQHSAM KPDPTRRRNR ALSSSSPSKT  60
   61 RPELSSGSPN RNTGEARGGK VKTSATLLDR EEMGLFPGSG YGDPNPEPRS FPYSVKQQCW 120
  121 E

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAEKIKGRDP ERWRRDHLGN IVFRKLVGCP GCLCHDYDHI VPYSKGGKST LENCQVLQAK  60
   61 VNRSKGNKTD ISRSELIQRS SYCRVAGRDM DLIELTAYGN VQRAPTSSGC RIQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.522879
Match: 2qgpA
Description: No description for 2qgpA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle