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View Structure Prediction Details

Protein: SBT16_ARATH
Organism: Arabidopsis thaliana
Length: 764 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SBT16_ARATH.

Description E-value Query
Range
Subject
Range
gi|92869887 - gi|92869887|gb|ABE79364.1| Orn/DAP/Arg decarboxylase 2; Protease-associated PA; Proteinase inhibitor...
501.0 [0..2] [764..11]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTIVLLL FLSFPFISFA ASQAAKTFIF RIDGGSMPSI FPTHYHWYST EFAEESRIVH  60
   61 VYHTVFHGFS AVVTPDEADN LRNHPAVLAV FEDRRRELHT TRSPQF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 2e1pA
Description: No description for 2e1pA was found.

Predicted Domain #2
Region A:
Residues: [107-764]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGLQNQKGLW SESDYGSDVI IGVFDTGIWP ERRSFSDLNL GPIPKRWRGV CESGARFSPR  60
   61 NCNRKIIGAR FFAKGQQAAV IGGINKTVEF LSPRDADGHG THTSSTAAGR HAFKASMSGY 120
  121 ASGVAKGVAP KARIAAYKVC WKDSGCLDSD ILAAFDAAVR DGVDVISISI GGGDGITSPY 180
  181 YLDPIAIGSY GAASKGIFVS SSAGNEGPNG MSVTNLAPWV TTVGASTIDR NFPADAILGD 240
  241 GHRLRGVSLY AGVPLNGRMF PVVYPGKSGM SSASLCMENT LDPKQVRGKI VICDRGSSPR 300
  301 VAKGLVVKKA GGVGMILANG ASNGEGLVGD AHLIPACAVG SNEGDRIKAY ASSHPNPIAS 360
  361 IDFRGTIVGI KPAPVIASFS GRGPNGLSPE ILKPDLIAPG VNILAAWTDA VGPTGLPSDP 420
  421 RKTEFNILSG TSMACPHVSG AAALLKSAHP DWSPAVIRSA MMTTTNLVDN SNRSLIDEST 480
  481 GKSATPYDYG SGHLNLGRAM NPGLVYDITN DDYITFLCSI GYGPKTIQVI TRTPVRCPTT 540
  541 RKPSPGNLNY PSITAVFPTN RRGLVSKTVI RTATNVGQAE AVYRARIESP RGVTVTVKPP 600
  601 RLVFTSAVKR RSYAVTVTVN TRNVVLGETG AVFGSVTWFD GGKHVVRSPI VVTQMDTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.0
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle