| Protein: | GATA8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 322 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GATA8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
146.0 | [0..2] | [312..1] |
|
Region A: Residues: [1-214] |
1 11 21 31 41 51
| | | | | |
1 MIGTSFPEDL DCGNFFDNMD DLMDFPGGDI DVGFGIGDSD SFPTIWTTHH DTWPAASDPL 60
61 FSSNTNSDSS PELYVPFEDI VKVERPPSFV EETLVEKKED SFSTNTDSSS SHSQFRSSSP 120
121 VSVLESSSSS SQTTNTTSLV LPGKHGRPRT KRPRPPVQDK DRVKDNVCGG DSRLIIRIPK 180
181 QFLSDHNKMI NKKKKKKAKI TSSSSSSGID LEVN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [215-322] |
1 11 21 31 41 51
| | | | | |
1 GNNVDSYSSE QYPLRKCMHC EVTKTPQWRL GPMGPKTLCN ACGVRYKSGR LFPEYRPAAS 60
61 PTFTPALHSN SHKKVAEMRN KRCSDGSYIT EENDLQGLIP NNAYIGVD
|
| Detection Method: | |
| Confidence: | 14.09691 |
| Match: | 4gatA |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.270879137859077 | bayes_pls_golite062009 |
