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View Structure Prediction Details

Protein: TBL29_ARATH
Organism: Arabidopsis thaliana
Length: 487 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TBL29_ARATH.

Description E-value Query
Range
Subject
Range
gi|26452343 - gi|26452343|dbj|BAC43257.1| unknown protein [Arabidopsis thaliana]
632.0 [0..1] [487..1]
gi|115440837, gi... - gi|34907966|ref|NP_915330.1| P0446G04.14 [Oryza sativa (japonica cultivar-group)], gi|215678742|dbj|...
531.0 [0..3] [486..21]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPWRRKFPL FETGVTMKQR KNSNLSIFVV VFSVFLFGIF MYNEDVKSIA EFPFSTSKPH  60
   61 DVHDEATPIT EITTLPVQES IKNSDPIQES IKNADSVQDS VKDVAEPVQE EVSKTEEVKK 120
  121 IELFAATEDE EDVELP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [137-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEECDLFTGE WVFDNETHPL YKEDQCEFLT AQVTCMRNGR RDSLYQNWRW QPRDCSLPKF  60
   61 KAKLLLEKLR NKRMMFVGDS LNRNQWESMV CLVQSVVPPG RKSLNKTGSL SVFRVEDYNA 120
  121 TVEFYWAPFL VE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.801 N/A N/A d.32.1 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase

Predicted Domain #3
Region A:
Residues: [269-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNSDDPNMHS ILNRIIMPES IEKHGVNWKG VDFLVFNTYI WWMN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [313-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TFAMKVLRGS FDKGDTEYEE IERPVAYRRV MRTWGDWVER NIDPLRTTVF FASMSPLHIK  60
   61 SLDWENPDGI KCALETTPIL NMSMPFSVGT DYRLFSVAEN VTHSLNVPVY FLNITKLSEY 120
  121 RKDAHTSVHT IRQGKMLTPE QQADPNTYAD CIHWCLPGLP DTWNEFLYTR IISRS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 66.337242
Match: PF03005.6
Description: No description for PF03005.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle