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View Structure Prediction Details

Protein: GPDHC_ARATH
Organism: Arabidopsis thaliana
Length: 462 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPDHC_ARATH.

Description E-value Query
Range
Subject
Range
GPDH2_ORYSJ - Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 2, cytosolic OS=Oryza sativa subsp. japonica GN...
292.0 [0..17] [462..16]

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Predicted Domain #1
Region A:
Residues: [1-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGSIEAKSL QSNGSVHHIG LNLEEKLDEF RRLLGKSEKD PLRIVSVGAG AWGSVFAALL  60
   61 QESYGGFRDK FQIRIWRRAG RAVDRETAEH LFEVINSRED ILRRLIRRCA YLKYVEARLG 120
  121 DRTLYADEIL KDGFCLNMVD TPLCPLKVVT NLQEAVWDAD IVVNGLPSTE TREVFEEISK 180
  181 YWKERITVPI IISLSKGIET ALEPVPHIIT PTKMIHQATG VPIDNVLYLG GPNIAAEIYN 240
  241 KEYANARICG AAKWRKPLAK FLRQPHFIVW DNSDLVTHEV MGGLKNVYAI GAGMVAALTN 300
  301 ESATSKSVYF AHCTSEMIFI THLLAEEPEK LAGPLLADTY VTLLKGRNAW YGQMLAKGEI 360
  361 NRDMGDSISG KGMIQGVSAV GAFYQLLSQS SLSILPSEEK KPVAPVESCP ILKTLYKILI 420
  421 TREQSTQAIL QALRDETLND PRDRIEIAQS HAFYRPSLLG QP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.221849
Match: 1x0vA
Description: No description for 1x0vA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle