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View Structure Prediction Details

Protein: TET8_ARATH
Organism: Arabidopsis thaliana
Length: 273 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TET8_ARATH.

Description E-value Query
Range
Subject
Range
gi|54859560 - gi|54859560|ref|NP_036303.1| transmembrane 4 superfamily member 17 isoform a [Homo sapiens]
182.0 [0..2] [260..14]
gi|109079854 - gi|109079854|ref|XP_001085953.1| PREDICTED: tetraspanin 17 isoform 2 [Macaca mulatta]
180.0 [0..2] [260..14]
gi|27735443 - gi|27735443|gb|AAH41304.1| Tm4sf9 protein [Xenopus laevis]
178.0 [0..2] [265..51]
gi|50752761 - gi|50752761|ref|XP_413732.1| PREDICTED: similar to RIKEN cDNA C230081A13 [Gallus gallus]
176.0 [0..1] [266..2258]
gi|73953301 - gi|73953301|ref|XP_852555.1| PREDICTED: similar to transmembrane 4 superfamily member 17 isoform a i...
176.0 [0..2] [260..14]
gi|55742059, gi|... - gi|55742059|ref|NP_001006754.1| F-box protein 23 [Xenopus (Silurana) tropicalis], gi|49522482|gb|AAH...
gi|55742059 - ref|NP_001006754.1| F-box protein 23 [Xenopus tropicalis]
175.0 [0..2] [260..14]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARCSNNLVG ILNFLVFLLS IPILAGGIWL SQKGSTECER FLDKPVIALG VFLMVVAIAG  60
   61 LIGSCCRVTW LLWVYLFVMF LLILLVFCIT VFAFVVTNKG AGEAIEGKGY KEYKLGDYST 120
  121 WLQKRVENGK NWNKIRSCLV ESKVCSKLEA KFVNVPVNSF YKEHLTALQS GC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CKPSDECGFE YVNPTTWTKN TTGTHTNPDC QTWDNAKEKL CFDCQSCKAG LLDNVKSAWK  60
   61 KVAIVNIVFL VFLIIVYSVG CCAFRNNKRD DSYSRTYGYK P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle