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View Structure Prediction Details

Protein: GASAE_ARATH
Organism: Arabidopsis thaliana
Length: 275 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GASAE_ARATH.

Description E-value Query
Range
Subject
Range
PRP2_MEDTR - Repetitive proline-rich cell wall protein 2 OS=Medicago truncatula GN=PRP2 PE=2 SV=1
185.0 [0..14] [275..28]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSLLSVFI FFHVFTNVVF AASNEESNAL VSLPTPTLPS PSPATKPPSP ALKPPTPSYK  60
   61 PPTLPTTPIK PPTTKPPVKP PTIPVTPVKP PVSTPPIKLP PVQPPTYKPP TPTVKPPSVQ 120
  121 PPTYKPPTPT VKPPTTSPVK PPTTPPVQSP PVQPPTYKPP TSPVKPPTTT PPVKPPTTTP 180
  181 PVQPPTYNPP TTPVKPPTAP PVKPPTPPP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.1
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [210-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRTRIDCVPL CGTRCGQHSR KNVCMRACVT CCYRCKCVPP GTYGNKEKCG SCYANMKTRG  60
   61 GKSKCP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 13.481486
Match: PF02704.5
Description: No description for PF02704.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle