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View Structure Prediction Details

Protein: THF1_ARATH
Organism: Arabidopsis thaliana
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for THF1_ARATH.

Description E-value Query
Range
Subject
Range
gi|58761181, gi|... - gi|58761181|gb|AAW82331.1| chloroplast thylakoid formation 1 [Arabidopsis thaliana], gi|21592994|gb|...
468.0 [0..1] [300..1]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAISSLS FPALGQSDKI SNFASSRPLA SAIRICTKFS RLSLNSRSTS KSLIHCMSNV  60
   61 TADVPPVSET KSKFLKAYKR PIPSIYNTVL QELIVQQHLM RYKKTYRYDP VFALGFVTVY 120
  121 DQLMEGYPSD QDRDAIFKAY IEALNEDPKQ YRIDAQKMEE WARSQTSASL VDFSSKEGDI 180
  181 EAVLKDIAGR AGSKEGFSYS RFFAVGLFRL LELASATDPT VLDKLCASLN INKKSVDRDL 240
  241 DVYRNLLSKL VQAKELLKEY VEREKKKQGE RAQSQKANET ISKCLGDTLY NPSFLVERKS 300
  301 

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle