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View Structure Prediction Details

Protein: gi|15222667, gi|...
Organism: Arabidopsis thaliana
Length: 478 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222667, gi|....

Description E-value Query
Range
Subject
Range
FP1_MYTGA - Adhesive plaque matrix protein OS=Mytilus galloprovincialis GN=FP1 PE=2 SV=1
243.0 [0..3] [477..177]

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Predicted Domain #1
Region A:
Residues: [1-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPNGWPSL LMLVIALYSV SAHTSAQYTY SPPSPPSYVY KPPTHIYSSP PPPPYVYSSP  60
   61 PPPPYIYKSP PPPPYVYSSP PPPPYIYKSP PPPPYVYSSP PPPPYIYKSP PPPPYVYSSP 120
  121 PPPPYVYKSP PPPPYVYNSP PPPPYVYKSP PPPPYVYSSP PPPPYVYKSP PPPPYVYSSP 180
  181 PPPPYVYKSP PPPPYVYSSP PPPPYVYKSP PPPPYVYSSP PPPPYVYKSP PPPPYVYSSP 240
  241 PPPPYVYKSP PPPPYVYSSP PPPPYVYK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [269-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPPPPPYVYS SPPPPPYVYK SPPPPPYVYS SPPPPPYVYK SPPPPPYVYS SPPPPPYVYK  60
   61 SPPPPPYVYN SPPPPPYVYK SPPPPPYVYS SPPPSPYVYK SPPPPPYVYS SPPPPPYVYK 120
  121 SPPPPPYVYS SPPPPPYVYK SPPPPPYVYS SPPPPPYVYK SPPPPPYVYS SPPPPPYVYK 180
  181 SPSPPPYVYK SPPPPPSYSY SYSSPPPPIY 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle