| Protein: | NU50A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 440 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NU50A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
203.0 | [0..50] | [425..1584] |
|
Region A: Residues: [1-193] |
1 11 21 31 41 51
| | | | | |
1 MGDSENVQQP SKKRGALKQL SRDNPGLDDD DDSAELESGT FKKASDEVLA SRRIVRVKRK 60
61 EPSAAPVAAS NPFAGIQLVP TTAPASTPVG TNAPLAESKL APAEAVVEDN QKASDIEEGD 120
121 EVDSKKVDVK DAVGEETEKT KDKDDNHCGK SADVQVAATE VAQMVSCDTN VCNNAVEGTD 180
181 QTDFPLEKDS GGD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [194-301] |
1 11 21 31 41 51
| | | | | |
1 QAEKKEKEGN GIEEADKNGD NGAFSSFQQH SSNKNAFTGL ASTEASGSSF SFGLVSQDGS 60
61 TGTGSLFGFG LPSSNSSSIF GATGSSIIKK SEGSGFPPKQ EVSTETGE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [302-440] |
1 11 21 31 41 51
| | | | | |
1 ENEKVAFSAD SIMFEYLDGG WKERGKGELK VNVSSNDGKA RLVMRAKGNY RLILNASLYP 60
61 EMKLANMDKK GITFACVNSV SEGKEGLSTF ALKFKDPTIV EEFRVAIDKH KDSKPMEKAA 120
121 EKSALPLKTP ENSPTATDT
|
| Detection Method: | |
| Confidence: | 38.39794 |
| Match: | 1xkeA |
| Description: | Solution structure of the second Ran-binding domain from human RanBP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.597587183571285 | bayes_pls_golite062009 |
| protein binding | 0.29116370406325 | bayes_pls_golite062009 |
