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View Structure Prediction Details

Protein: gi|91806578, gi|...
Organism: Arabidopsis thaliana
Length: 155 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|91806578, gi|....

Description E-value Query
Range
Subject
Range
gi|21554342 - gi|21554342|gb|AAM63449.1| unknown [Arabidopsis thaliana]
186.0 [0..1] [155..1]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLQCRHQH VFILLLVLFH SSLFGLASKI DVSDDARGIR IDGGQKRFLT NSPQHGKEHA  60
   61 ACTNEEPDLG PLTRISCNEP GYVITKINFA DYGNPTGTCG HFRRGNCGAR ATMRIVKKNC 120
  121 LGKEKCHLLV TDEMFGPSKC KGAPMLAVET TCTIA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.346787
Match: PF02140.9
Description: No description for PF02140.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.228 N/A N/A b.43.4 Riboflavin synthase domain-like
View Download 0.226 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.222 N/A N/A b.59.1 XRCC4, N-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle