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View Structure Prediction Details

Protein: gi|7486119, gi|7...
Organism: Arabidopsis thaliana
Length: 550 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7486119, gi|7....

Description E-value Query
Range
Subject
Range
gi|114624278 - gi|114624278|ref|XP_528584.2| PREDICTED: similar to ADP,ATP carrier protein, liver isoform T2 varian...
312.0 [0..45] [498..26]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTKGSVK KSSIKHSCNL AEVKRKLSKI SDHHSHVEYA YAFQRDNRER VDTRLSQILS  60
   61 RDALISAVDL LWDRSGFVSL KEGNFDYVDR DEVSSEKAKS QLSSTPQSRV RLLGVAEKMY 120
  121 SFDPYNRKSL LNQTDGSKSI CGSCKGIGFP FEARWKTLYS WMEGVLPSST RYHEEGAEIE 180
  181 KRENFEGCIL NPVSSKEELA SRNGDGCDCV FDAIGAKDQS TVI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [224-550]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPRSLLLATV AESVVDTRVS RSNDVNYLFL LYKDRCVNNK GVNMISSKCS TDCDAEVSSS  60
   61 GNNLDEDCLS IVENKQLLEK DRNDKETEVC LSSPETTTYA FAKQRHAFAG ALAGISVSLC 120
  121 LHPLDTVKTM IQSCRLEEKS LCNTGRSIIS ERGFSGLYRG IASNIASSAP ISALYTFTYE 180
  181 TVKGTLLPLF PKEYCSLAHC LAGGSASIAT SFIFTPSERI KQQMQVSSHY RNCWTALVGI 240
  241 IQKGGLLSLY AGWTAVLCRN IPHSIIKVRF AHTIIGLIPR LVMYMSQGAI FFASYEFYKS 300
  301 VLSLAAAQPN TSALSGTKQK MEIALNR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.69897
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle