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View Structure Prediction Details

Protein: COX6A_ARATH
Organism: Arabidopsis thaliana
Length: 102 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COX6A_ARATH.

Description E-value Query
Range
Subject
Range
gi|21595807 - gi|21595807|gb|AAM66133.1| unknown [Arabidopsis thaliana]
135.0 [0..1] [102..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAIVRSAL SRAVTRAAPK TSVAPKRNFS SSAGHDDAYE AAKWEKITYL GIASCTALAV  60
   61 YVLSKGHHHG EDPPAYPHMH IRNKEFPWGP DGLFEVKHNK EH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.39794
Match: 1occG
Description: Mitochondrial cytochrome c oxidase subunit VIa
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle