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View Structure Prediction Details

Protein: gi|25407318, gi|...
Organism: Arabidopsis thaliana
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25407318, gi|....

Description E-value Query
Range
Subject
Range
GLMU_PSYWF - Bifunctional protein GlmU OS=Psychrobacter sp. (strain PRwf-1) GN=glmU PE=3 SV=1
177.0 [0..2] [298..167]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSLRTLFS VSTHGVFLNK RSSYRVRKVF VGMPLRICSE IPRFVSVSCI RSDMCGIMML  60
   61 GKDVHDLLET SSGGNVEKGF LRW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.0
Match: 1fwyA
Description: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain; N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [84-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNGGGMYHRS ALIDSSALVE FGAVVHQEAI LGAEVHIGSN TVIGSSVKIG PSTKIGNCSI  60
   61 GDLCVIHNGV CIGQDGFGFY VDDNGNMVKK PQTLNVKIGN RVEIGANTCI DRGSWRDTVI 120
  121 GDDTKIDNLV QIGHNVIIGK CCLFCGQVGI AGSAEIGDFV ALGGRVAVRD HVSIVSKVRL 180
  181 AANSCVTKNI TEPGDYGGFP AQEETITYSV CQTQED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.154902
Match: 2iu8A
Description: No description for 2iu8A was found.

YRC Informatics Platform - Version 3.0
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