| Protein: | gi|7268785, gi|5... |
| Organism: | Arabidopsis thaliana |
| Length: | 1302 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for gi|7268785, gi|5....
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MLRSRRSRSR HGAQACAVMS AVLLLASVSL LYTRLSLFSS HSPNHLRSGS SEDTVLFPDS 60
61 VLVSDSDVET TGGGGRGSTT STEDRIDEHD DAIEDDGVSN EEDENQDAEQ EQEVDLNRNK 120
121 AASSSGFYFD HVNGVIRRAF NKRSIDEWDY DYTGFSID
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [159-378] |
1 11 21 31 41 51
| | | | | |
1 SDSSGDKSSR AAFGSDDVPL DESIRRKIVE VTSVEDALLL KSGKKVSPLR QGWGDWFDKK 60
61 GDFLRRDRMF KSNIETLNPL NNPMLQDPDS VGNTGLTRGD KVVQKWRLNQ IKRNPFMAKK 120
121 PLSVVSEKKE PNEFRLLSSV GEIKRGERKT LDNDEKIERE EQKNVESERK HDEVTEHMYA 180
181 DGTKWGYYPG IEPSLSFSDF MDSFFRKEKC SMRVFMVWNS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [379-502] |
1 11 21 31 41 51
| | | | | |
1 PGWMFSVRHQ RGLESLLSQH RDACVVVFSE TVELDFFRNS FVKDSYKVAV AMPNLDELLQ 60
61 DTPTHVFASV WFDWRKTKFY PTHYSELVRL AALYKYGGVY LDSDVIVLGS LSSLRNTIGM 120
121 EDQV
|
| Detection Method: | |
| Confidence: | 28.376751 |
| Match: | PF04488.7 |
| Description: | No description for PF04488.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [503-652] |
1 11 21 31 41 51
| | | | | |
1 AGESLNGAVM SFEKKSPFLL ECLNEYYLTY DDKCLRCNGA DLLTRVAKRF LNGKNRRMNQ 60
61 QELNIRPSSV FFPINSQQIT NYFAYPAIED ERSQQDESFK KILNESLTFH FWNSVTSSLI 120
121 PEPESLVAKL ISSDHESSDL SLPSSPSSSP
|
| Detection Method: | |
| Confidence: | 72.958607 |
| Match: | PF04572.4 |
| Description: | No description for PF04572.4 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [653-812] |
1 11 21 31 41 51
| | | | | |
1 SQCLVKSVCS LVCTSYLRQN HVVSSPHRVN LDFDANSLTH EQAITVVASL ASESGSMVAL 60
61 CFFYWAVGFE KFRHFMRLYL VTADSLLANG NLQKAHEVMR CMLRNFSEIG RLNEAVGMVM 120
121 DMQNQGLTPS SITMNCVLEI AVELGLIEYA ENVFDEMSVR
|
| Detection Method: | |
| Confidence: | 36.154902 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [813-1302] |
1 11 21 31 41 51
| | | | | |
1 GVVPDSSSYK LMVIGCFRDG KIQEADRWLT GMIQRGFIPD NATCTLILTA LCENGLVNRA 60
61 IWYFRKMIDL GFKPNLINFT SLIDGLCKKG SIKQAFEMLE EMVRNGWKPN VYTHTALIDG 120
121 LCKRGWTEKA FRLFLKLVRS DTYKPNVHTY TSMIGGYCKE DKLNRAEMLF SRMKEQGLFP 180
181 NVNTYTTLIN GHCKAGSFGR AYELMNLMGD EGFMPNIYTY NAAIDSLCKK SRAPEAYELL 240
241 NKAFSCGLEA DGVTYTILIQ EQCKQNDINQ ALAFFCRMNK TGFEADMRLN NILIAAFCRQ 300
301 KKMKESERLF QLVVSLGLIP TKETYTSMIS CYCKEGDIDL ALKYFHNMKR HGCVPDSFTY 360
361 GSLISGLCKK SMVDEACKLY EAMIDRGLSP PEVTRVTLAY EYCKRNDSAN AMILLEPLDK 420
421 KLWIRTVRTL VRKLCSEKKV GVAALFFQKL LEKDSSADRV TLAAFTTACS ESGKNNLVTD 480
481 LTERISRGVG
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
