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View Structure Prediction Details

Protein: P4KG8_ARATH
Organism: Arabidopsis thaliana
Length: 533 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P4KG8_ARATH.

Description E-value Query
Range
Subject
Range
gi|110739176, gi... - gi|145339580|ref|NP_191219.2| inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol g...
613.0 [0..1] [533..4]
gi|92894700 - gi|92894700|gb|ABE92357.1| Phosphatidylinositol 3- and 4-kinase, catalytic [Medicago truncatula]
544.0 [0..26] [533..82]
gi|222635400, gi... - gi|55297407|dbj|BAD69260.1| phosphatidylinositol 3- and 4-kinase family-like [Oryza sativa Japonica ...
537.0 [0..26] [533..131]
gi|90657540 - gi|90657540|gb|ABD96840.1| hypothetical protein [Cleome spinosa]
516.0 [0..25] [533..92]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVALDPLTD RFSQFSRSSQ RCRLQSLTNL DFNFLGFNTK QTNLSASSHS LNNRSVSTPC  60
   61 FSISGSNLDG SATPHIEILG GQRVPTVRSL VAEVTIAIVS GAQPLLLPSG LGGAYLLQTE 120
  121 KGNNIAVAKP VDEEPLAFNN PKGSGGLTLG QPGMKRSIRV GESGIRELAA YLLDHQGFSS 180
  181 VPPTALVRI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [190-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHVPFHDRGS DHAAYKVASL QRFVGHDFDA GELGPGSFTV VSVHRIGILD VRVLNLDRHA  60
   61 GNMLVKKIHD QDETTCSNGV GAAELVPIDH GLCLPECLDD PY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.344 N/A N/A a.60.8 HRDC-like
View Download 0.336 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.272 N/A N/A a.158.1 F-box domain
View Download 0.272 N/A N/A a.158.1 F-box domain
View Download 0.259 N/A N/A a.69.4 Description not found.
View Download 0.247 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like

Predicted Domain #3
Region A:
Residues: [292-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FEWLNWPQAS VPFTDIELQY ISNLDPFKDA ELLRTELDSI QESS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.595 N/A N/A a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.494 N/A N/A a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.489 N/A N/A a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.449 N/A N/A a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.446 N/A N/A a.8.5 Description not found.
View Download 0.416 N/A N/A a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.392 N/A N/A a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.359 N/A N/A a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.348 N/A N/A a.10.2 Description not found.
View Download 0.344 N/A N/A a.8.1 Bacterial immunoglobulin/albumin-binding domains

Predicted Domain #4
Region A:
Residues: [336-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRVLIVCTIF LKEAAAAGLS LAEIGEKMTR DICRGEESSS VLEILCNKAK ASAVSGSDDD  60
   61 DDYSSEWNEV EAELECGIFQ FD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.854 N/A N/A a.4.1 Homeodomain-like
View Download 0.661 N/A N/A a.64.1 Saposin
View Download 0.655 N/A N/A a.246.2 Description not found.
View Download 0.650 N/A N/A a.73.1 Retrovirus capsid protein, N-terminal core domain
View Download 0.549 N/A N/A a.64.1 Saposin
View Download 0.547 N/A N/A a.64.1 Saposin
View Download 0.481 N/A N/A a.64.1 Saposin
View Download 0.478 N/A N/A a.4.5 "Winged helix" DNA-binding domain

Predicted Domain #5
Region A:
Residues: [418-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEVECKELPD MLQVPIFTRV PSIAANLSAL MRCPPNQWIS TYDTNIEEER RDRSIVRSKS  60
   61 HPICVNYDEK EGVYFGDMSG DEWEMFLHSF QMLLPEALEG STSKGPKPRF GSSCKF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.410 N/A N/A d.56.1 GroEL-intermediate domain like
View Download 0.385 N/A N/A d.58.26 GHMP Kinase, C-terminal domain
View Download 0.297 N/A N/A a.85.1 Hemocyanin, N-terminal domain
View Download 0.278 N/A N/A b.55.1 PH domain-like
View Download 0.278 N/A N/A b.55.1 PH domain-like
View Download 0.256 N/A N/A b.55.1 PH domain-like
View Download 0.256 N/A N/A b.55.1 PH domain-like
View Download 0.256 N/A N/A a.46.1 Methionine synthase domain
View Download 0.204 N/A N/A c.100.1 Thiamin pyrophosphokinase, catalytic domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle