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View Structure Prediction Details

Protein: ANX1_ARATH
Organism: Arabidopsis thaliana
Length: 850 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for ANX1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGKTRILFF LTCLSFLLVF PTRSNGQDLA LSCGTSEASA DQDKKKWEPD TKFLKTGNSI  60
   61 HATATYQDPS LLSTVPYMTA RIFTAPATYE IPIKGDKRHL LRLYFYPSTY TG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNISNSYFTV EANDVTLLSN FSAAITCQAL TQAYLVKEYS LAPTDKDVLS IKFTPSDKYR  60
   61 DAFAFINGIE VIQMPELFDT AALVGFTDQT MDAKTANLQS MFRLNVGGQD IPGSQDSGGL 120
  121 TRTWYNDAPY IFSAGLGVTL QASNNFRINY QNMPVSIAPA DIYKTARSQG PNGDINLKSN 180
  181 LTWMFQIDKN FTYILRLHFC EFQLSKINQK VFNIYINNRT AQADTTPADI IGWTGEKGIP 240
  241 MYKDYAIYVD ANNGGEEITL QMTPSTFGQP EYYDSSLNGL EIFKMDTMKN LAGPNPE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 1ogqA
Description: Polygalacturonase inhibiting protein PGIP
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [410-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSPMQAEEEV KKEFKNEKRH AFIIGSAGGV LAVLIGALCF TAYKKKQGYQ GGDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [464-850]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HTSSWLPIYG NSTTSGTKST ISGKSNNGSH LSNLAAGLCR RFSLPEIKHG TQNFDDSNVI  60
   61 GVGGFGKVYK GVIDGTTKVA VKKSNPNSEQ GLNEFETEIE LLSRLRHKHL VSLIGYCDEG 120
  121 GEMCLVYDYM AFGTLREHLY NTKKPQLTWK RRLEIAIGAA RGLHYLHTGA KYTIIHRDVK 180
  181 TTNILVDENW VAKVSDFGLS KTGPNMNGGH VTTVVKGSFG YLDPEYFRRQ QLTEKSDVYS 240
  241 FGVVLFEILC ARPALNPSLP KEQVSLGDWA MNCKRKGNLE DIIDPNLKGK INAECLKKFA 300
  301 DTAEKCLNDS GLERPTMGDV LWNLEFALQL QETADGTRHR TPNNGGSSED LGRGGMAVNV 360
  361 AGRDDVSDLS SEDNTEIFSQ IVNPKGR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.221849
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle