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View Structure Prediction Details

Protein: CRR38_ARATH
Organism: Arabidopsis thaliana
Length: 252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRR38_ARATH.

Description E-value Query
Range
Subject
Range
gi|51969740 - gi|51969740|dbj|BAD43562.1| putative protein [Arabidopsis thaliana]
308.0 [0..1] [250..15]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF  60
   61 SQLSYKVPST GFAASSTGNT P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-177]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNVNGLALCR GDASSSDCRS CLETAIPELR QRCPNNKAGI VWYDNCLVKY SSTNFFGKID  60
   61 FENRFYLYNV KNVSDPSTFN SQTKALLTEL TKKATT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.481486
Match: PF01657.8
Description: No description for PF01657.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [178-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDNQKLFATG EKNIGKNKLY GLVQCTRDLK SITCKACLNG IIGELPNCCD GKEGGRVVGG  60
   61 SCNFRYEIYP FVKTA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.408935
Match: PF01657.8
Description: No description for PF01657.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.802 N/A N/A d.95.2 Homing endonucleases


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle