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View Structure Prediction Details

Protein: gi|91806610, gi|...
Organism: Arabidopsis thaliana
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|91806610, gi|....

Description E-value Query
Range
Subject
Range
gi|7447980, gi|2... - pir||T10119 glucan endo-1,3-beta-D-glucosidase (EC 3.2.1.39) - sweet orange, gi|2274915|emb|CAA03908...
423.0 [0..33] [372..1]

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Predicted Domain #1
Region A:
Residues: [1-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMILMTTMQ NAFWILLVFS ISMASCSTIP SLVGPQIGIN YGEYSSNLED SSPVIGINYG  60
   61 RYGSNLPPPE AIPSLVNSLS IKHVKTFDLD PRITKSFANT GITLSLCIPN DKIPSLATNL 120
  121 SEAESIIRNF ILPYHKNTII TAISVGNEVS LLPQFSNHLV SAMVNVHKAI KRYRLHKKIK 180
  181 VSTTHSLAIL SRRFPPSTAV FHQSIGDSVL EPLIRFLQRT NSPLMVNVYP YLAYKQSFPS 240
  241 IPLDFALFQP MNSPRRRRYI DPYTGVAYTN LFDIMLDSVD SAVKSLGLPE IPVVVSEIGW 300
  301 PTRGDPGETA ANLENARVFN QRLVEHLRRR WNKVPVYIFA LFDEDQKTGN AVEKHWGLLY 360
  361 GNGSRKYDLN FSPPI

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Detection Method: PSI-BLAST
Confidence: 108.0
Match: 2cygA
Description: Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.32563207632796 bayes_pls_golite062009
hydrolase activity 0.85514037342026 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 0.80912338090552 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 0.41375210927547 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle