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View Structure Prediction Details

Protein: NPR6_ARATH
Organism: Arabidopsis thaliana
Length: 467 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPR6_ARATH.

Description E-value Query
Range
Subject
Range
gi|115628164, gi... - gi|115941075|ref|XP_001187293.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
428.0 [0..3] [458..80]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTFEESLK SMSLDYLNLL INGQAFSDVT FSVEGRLVHA HRCILAARSL FFRKFFCESD  60
   61 PSQPGAEPAN QTGSGARAAA VGGVIPVNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.39794
Match: 2nn2A
Description: No description for 2nn2A was found.

Predicted Domain #2
Region A:
Residues: [90-467]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGYEVFLLLL QFLYSGQVSI VPHKHEPRSN CGDRGCWHTH CTAAVDLSLD ILAAARYFGV  60
   61 EQLALLTQKH LTSMVEKASI EDVMKVLIAS RKQDMHQLWT TCSYLIAKSG LPQEILAKHL 120
  121 PIELVAKIEE LRLKSSMPLR SLMPHHHDLT STLDLEDQKI RRMRRALDSS DVELVKLMVM 180
  181 GEGLNLDESL ALIYAVENCS REVVKALLEL GAADVNYPAG PTGKTALHIA AEMVSPDMVA 240
  241 VLLDHHADPN VQTVDGITPL DILRTLTSDF LFKGAIPGLT HIEPNKLRLC LELVQSAALV 300
  301 ISREEGNNNS NDNNTMIYPR MKDEHTSGSS LDSRLVYLNL GATNRDIGDD NSNQREGMNL 360
  361 HHHHHDPSTM YHHHHHHF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.39794
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle