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View Structure Prediction Details

Protein: gi|6561963, gi|1...
Organism: Arabidopsis thaliana
Length: 369 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6561963, gi|1....

Description E-value Query
Range
Subject
Range
gi|213876867, gi... - gi|8919865|emb|CAB96202.1| gibberellin 20-oxidase [Citrus sinensis x Poncirus trifoliata], gi|213876...
340.0 [0..11] [369..22]

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Predicted Domain #1
Region A:
Residues: [1-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNFKSLLP VIGTDETLNS LFSANVALII KVFILNLKET KMHETMVFVD ISPLVVKCDD  60
   61 ANMAEDAGVA EVVGKLDRAC RDAGFFYVIG HGISEDFIRK VRVMSHQFFE LPYEEKLKIK 120
  121 ITPAAGYRGY QRIGLNLTNG KQDMHEAIDC YKEFKQGKHG DIGKVMEGAN QWPENPQEYK 180
  181 ELMEEYIKLC IDLSRNILRG ISLALGGSPY EFEGKMLTDP FWIMRILGYP VTRLIFFTYS 240
  241 GAHTDYGLLS LINQDDDKTA LQVRDLAGDW IPVIPIPGSF VCNIGDMLKI LSNGVYESTL 300
  301 HRVINNSPRY RVCVGFFYET NFDAAVEPLD IFKEKYPGKG TSQVFKRVVY GEHLVHKLQT 360
  361 TFQNLVEHS

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Detection Method: PSI-BLAST
Confidence: 84.0
Match: 2brtA
Description: No description for 2brtA was found.

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 2.13037944896112 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors 1.96457406152694 bayes_pls_golite062009
binding 1.78258647804494 bayes_pls_golite062009
catalytic activity 0.921320409505 bayes_pls_golite062009
nucleic acid binding 0.778311364997835 bayes_pls_golite062009
DNA binding 0.705906158188305 bayes_pls_golite062009
protein binding 0.200706152890822 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle