YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: STGL4_ARATH
Organism: Arabidopsis thaliana
Length: 174 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STGL4_ARATH.

Description E-value Query
Range
Subject
Range
gi|9454547 - gi|9454547|gb|AAF87870.1|AC012561_3 Hypothetical protein [Arabidopsis thaliana]
160.0 [0..2] [174..1]

Back

Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSIKLTLCA LIFFLLNSLL HHVLGHDNQL NTTSSWLKSH IKAATTTNWG RPKPPMCKPW  60
   61 ICKRSGPSEA RMRCCRNQCV DVLSDPNHCR FCFKSCRFAL SCCDGDCVDT NTDPSNCGQC 120
  121 GNECESGAPC EFGMCGYAAP SSQPGKRHRR HKFHRPRPPP SPDSKLNYDD HDDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.39794
Match: 1jv2B
Description: Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle