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View Structure Prediction Details

Protein: gi|110741179, gi...
Organism: Arabidopsis thaliana
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110741179, gi....

Description E-value Query
Range
Subject
Range
gi|34146828 - gi|34146828|gb|AAQ62422.1| At1g53760 [Arabidopsis thaliana]
434.0 [0..1] [272..1]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRARLVVFPI KGKKWCFSRS VDPFAAQSPS GVTPTTVRGL WKKISSESKP INANAELLVD  60
   61 FISDKMNKAW VGLEKAPDGS IKNKIHGFGL KLLARVKPSE IFLKSISKEV TSVQVTYPPS 120
  121 LDPRLVRRRL RHIAMSGTIL HKKYLVGSVT LLPLTSAFMV LPLPNIPFFW VLFRTYSHWR 180
  181 ALQGSEKLLK LIS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [194-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEANPDKPDS TDDADESKNS NTKPEQKSQS PTCILLPSEE LYQLIREASE EGLDEATIIE  60
   61 ICKSFDLNKN DVLKYRNLV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle