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View Structure Prediction Details

Protein: gi|11358441, gi|...
Organism: Arabidopsis thaliana
Length: 328 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11358441, gi|....

Description E-value Query
Range
Subject
Range
gi|238796617, gi... - gi|77963167|ref|ZP_00826979.1| COG4775: Outer membrane protein/protective antigen OMA87 [Yersinia mo...
179.0 [0..29] [285..519]

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Predicted Domain #1
Region A:
Residues: [1-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATVLLHT GTQLIGEAIL ESEFSKLCYV KYIQFFSTCM CVRLTMTDGR YQRSGRISYN  60
   61 MQNSLLCSGN THDSMVVLKQ ESRFAKATDQ GLSHFSMQIE QGIPVVSNWL IFNRFKFVAS 120
  121 KGVRFGPAFP LASLTGGSIV GDMTPYQAFA IGGLGSVRGY GEVAVGSGRS CLVANTELAN 180
  181 KMTEGTIFLD CGTDLGSSRL VPVSSLYLLR TRTIKKLLRH ENDKAVAELV SGNPSLRQGK 240
  241 PGFGYGFGYG LRFKSPLGHL QVDYAMNAFN QKTLYFGLKV FIGLVYTAAR VLSESCRFHR 300
  301 EENTFDLMVL QIRTYLLLLH IYVTMADS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.89
Match: 2qdzA
Description: No description for 2qdzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle