| Protein: | EF107_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 201 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EF107_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
201.0 | [0..1] | [189..68] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 METFEESSDL DVIQKHLFED LMIPDGFIED FVFDDTAFVS GLWSLEPFNP VPKLEPSSPV 60
61 LDPDSYVQEI LQMEAESSSS SSTTTSPEVE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.454 | d.58.17 | Metal-binding domain |
| View | Download | 0.387 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.358 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.325 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.293 | a.5.2 | UBA-like |
|
Region A: Residues: [91-201] |
1 11 21 31 41 51
| | | | | |
1 TVSNRKKTKR FEETRHYRGV RRRPWGKFAA EIRDPAKKGS RIWLGTFESD IDAARAYDYA 60
61 AFKLRGRKAV LNFPLDAGKY DAPVNSCRKR RRTDVPQPQG TTTSTSSSSS N
|
| Detection Method: | |
| Confidence: | 26.045757 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
