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View Structure Prediction Details

Protein: gi|15232697, gi|...
Organism: Arabidopsis thaliana
Length: 628 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15232697, gi|....

Description E-value Query
Range
Subject
Range
gi|91806405 - gi|91806405|gb|ABE65930.1| exocyst subunit EXO70 family protein [Arabidopsis thaliana]
664.0 [0..2] [608..1]

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Predicted Domain #1
Region A:
Residues: [1-628]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTRKAMINI CCVATTPSKY PPPPPLTLTP RQSLESAAIY GVIESAADII ERWNTETNTF  60
   61 AKVTCMFYEN KPEAMMFIER VKDLQKTMDV LVSEDPNSER LLRSHKLMQI AMKRLQKEFY 120
  121 QILSMNRAYL DPESVSTRSS LTSARSSYSD FPDYVEDLDT IIELEEVSTN VMTDLKSIAE 180
  181 CMIGSGYAKE CLSIYKSIRK SIIDEGIYRL EVEKTSTGKV KKMSWEVMEL KIRSWLKAVK 240
  241 VSMETLFKGE KILCDHVFES SDAIRESCFS DISRDGALLL FGFPEIINTK TSKKHSPPEK 300
  301 VFRLLDMYTA IAGNWQAIES IFSFDSISVV RSLALKSLIS LSESIRSLLV EFESGIQKDS 360
  361 SKVVVPGGGV HPLTISVMDH LSLLADYSNV LVDILAGSPP PDRSLLPESY FNVSESDDSP 420
  421 SSELTIRFAW IILVLLCKID RKSIHYKDFS IQYLFLTNNL QHVVSRARSS NLKNLLGEDW 480
  481 ITRHFAKMRQ FAGSYKRLAW GPVVATLPEN RTVEMTPEEV KERFEKFSES FENAYSKHSV 540
  541 CVVADPNIRD EIKVSISRKL VPIYREFYNT RGSVILGEGD GARNLNSVVR FTPEDIENYL 600
  601 SDLFREKGSS GNSSASSPSS CRSRQSMS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle