| Protein: | gi|15234737, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 735 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15234737, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
307.0 | [0..197] | [719..2] |
|
Region A: Residues: [1-262] |
1 11 21 31 41 51
| | | | | |
1 MGKIKDQKGK EHDHSQCRRY VLQSYLLRTE HISPNSTRNI NMITQDDSLC LLSISIYTLN 60
61 SSHASLWLFT RSEEESADFG ESEDPSKTVR KRKKLSSSKL GFRRLDNQSK KDQLFNEPLF 120
121 TGFSNVLLSV FKKDCVAKSY FAAPKEPASV PVSSPTREAE TEINSASPVT QSTVPDSTNQ 180
181 ESTVQRSSGQ QTEHFQGVAL KFVLPGLNIL EYMLSPPPRS SPFRTNGFTI HPETWETGSY 240
241 RTQPSTSNNT EELHFLEEGV NT
|
| Detection Method: |  |
| Confidence: | 1.15 |
| Match: | 1eysC |
| Description: | Photosynthetic reaction centre (cytochrome subunit) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [263-495] |
1 11 21 31 41 51
| | | | | |
1 PVRSPVTQDS GGFSGRTRAL AQHLKERYSG YLSLNKILEG KTRKIAARMF YETLGEVPEI 60
61 VQKIIQEVRQ SLKSRLMEIL RLPFKKRFSW NERNRALHEF KVDGNKEVLY KSSKGKRCFE 120
121 CKGFRHMCSE CANLMKEKEK KFIMSDSEID SDDGEELKNL VAFTTFESSI ASASASGPTS 180
181 ASATGSTSAS ATGPATGSDN DQSDDDDLSI SDEEFAENYK ALYEHCVKVV EEN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [496-735] |
1 11 21 31 41 51
| | | | | |
1 SVLTKEKLKL EAKVVKTLKF AAEKEEEASQ LEETQKNLRM LNNGTKKLGH ILSIGKTDKC 60
61 GLGFKGNPSK SDPVFVYGGK ITSASGTVKE TATVAEIASD TRTDSRTDTE TTSGTRKVQK 120
121 LQSEPRRVFR PVCHHCGVVG HIRPRCFRLL REKNRLMNAY DVRFHGPKCY HYGVQGHIKR 180
181 NCFRFIRECS HEGLRRNKVW VRKDDFHGSG GENDDVFGDV VLELELMSSQ HSQKGGDLKM 240
241
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
