| Protein: | MBD4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 186 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MBD4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
224.0 | [0..3] | [181..36] |
|
Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MKEEEEIGKP AKPKAKKDVA PGRLIDTYAA QCDNCHKWRV IDSQEEYEDI RSKMLEDPFN 60
61 CQKKQGMSCE EPADIDYDSS RTWVIDKPGL PKTPKGFKRS LVLRKDYSKM DTYYFTPTGK 120
121 KLRSRNEIAA FVEANPEFRN APLGDFNFTV PKVMEDTVPP DPKLGSPFPS TTTTTSEKSS 180
181 VKQSHN
|
| Detection Method: |  |
| Confidence: | 22.522879 |
| Match: | 1ub1A |
| Description: | Solution structure of the matrix attachment region-binding domain of chicken MeCP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
