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View Structure Prediction Details

Protein: gi|7267694, gi|7...
Organism: Arabidopsis thaliana
Length: 963 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7267694, gi|7....

Description E-value Query
Range
Subject
Range
gi|91083753 - gi|91083753|ref|XP_971465.1| PREDICTED: similar to Tubulin tyrosine ligase-like protein 2 (Testis-sp...
465.0 [0..27] [622..315]
gi|92878970 - gi|92878970|gb|ABE85328.1| MT-A70 [Medicago truncatula]
432.0 [0..65] [963..125]
gi|115482260, gi... - gi|115482260|ref|NP_001064723.1| Os10g0447600 [Oryza sativa (japonica cultivar-group)], gi|113639332...
414.0 [0..220] [944..310]
gi|58389890, gi|... - gi|58389890|ref|XP_317346.2| ENSANGP00000010457 [Anopheles gambiae str. PEST], gi|55237571|gb|EAA123...
367.0 [0..559] [874..75]
MET14_CHICK - N6-adenosine-methyltransferase subunit METTL14 OS=Gallus gallus GN=METTL14 PE=2 SV=1
362.0 [0..566] [865..115]
gi|10047331 - gi|10047331|dbj|BAB13453.1| KIAA1627 protein [Homo sapiens]
ENSPTRT00000030485 - null
360.0 [0..566] [865..127]
gi|109075492 - gi|109075492|ref|XP_001098431.1| PREDICTED: similar to CG7818-PA [Macaca mulatta]
360.0 [0..566] [865..115]
gi|187469693, gi... - gi|34859963|ref|XP_215698.2| PREDICTED: similar to CG7818-PA [Rattus norvegicus], gi|187469693|gb|AA...
359.0 [0..566] [865..115]

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Predicted Domain #1
Region A:
Residues: [1-664]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKQEESSL EKLSTWYQDG EQDGGDRSEK RRMSLKASDF ESSSRSGGSK SKEDNKSVVD  60
   61 VEHQDRDSKR ERDGRERTHG SSSDSSKRKR WDEAGGLVND GDHKSSKLSD SRHDSGGERV 120
  121 SVSNEHGESR RDLKSDRSLK TSSRDEKSKS RGVKDDDRGS PLKKTSGKDG SEVVREVGRS 180
  181 NRSKTPDADY EKEKYSRKDE RSRGRDDGWS DRDRDQEGLK DNWKRRHSSS GDKDQKDGDL 240
  241 LYDRGREREF PRQGRERSEG ERSHGRLGGR KDGNRGEAVK ALSSGGVSNE NYDVIEIQTK 300
  301 PHDYVRGESG PNFARMTESG QQPPKKPSNN EEEWAHNQEG RQRSETFGFG SYGEDSRDEA 360
  361 GEASSDYSGA KARNQRGSTP GRTNFVQTPN RGYQTPQGTR GNRPLRGGKG RPAGGRENQQ 420
  421 GAIPMPIMGS PFANLGMPPP SPIHSLTPGM SPIPGTSVTP VFMPPFAPTL IWPGARGVDG 480
  481 NMLPVPPVLS PLPPGPSGPR FPSIGTPPNP NMFFTPPGSD RGGPPNFPGS NISGQMGRGM 540
  541 PSDKTSGGWV PPRGGGPPGK APSRGEQNDY SQNFVDTGMR PQNFIRELEL TNVEDYPKLR 600
  601 ELIQKKDEIV SNSASAPMYL KGDLHEVELS PELFGTKFDV ILVDPPWEEY VHRAPGVSDS 660
  661 MEYW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.30103
Match: 1y0fA
Description: No description for 1y0fA was found.

Predicted Domain #2
Region A:
Residues: [665-856]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TFEDIINLKI EAIADTPSFL FLWVGDGVGL EQGRQCLKKW GFRRCEDICW VKTNKSNAAP  60
   61 TLRHDSRTVF QRSKEHCLMG IKGTVRRSTD GHIIHANIDT DVIIAEEPPY GSTQKPEDMY 120
  121 RIIEHFALGR RRLELFGEDH NIRAGWLTVG KGLSSSNFEP QAYVRNFADK EGKVWLGGGG 180
  181 RNPPPDAPHL VV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 49.853872
Match: PF05063.6
Description: No description for PF05063.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [857-963]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTPDIESLRP KSPMKNQQQQ SYPSSLASAN SSNRRTTGNS PQANPNVVVL HQEASGSNFS  60
   61 VPTTPHWVPP TAPAAAGPPP MDSFRVPEGG NNTRPPDDKS FDMYGFN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle