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View Structure Prediction Details

Protein: gi|12323773, gi|...
Organism: Arabidopsis thaliana
Length: 414 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12323773, gi|....

Description E-value Query
Range
Subject
Range
gi|9802560 - gi|9802560|gb|AAF99762.1|AC003981_12 F22O13.20 [Arabidopsis thaliana]
244.0 [0..10] [413..1807]

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Predicted Domain #1
Region A:
Residues: [1-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG  60
   61 SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ AAFRAFLARQ ALRALKAVVR 120
  121 IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA 180
  181 EKGWCDSPGS INEVRTKLQM RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG 240
  241 SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.09691
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [284-414]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EHDTVQVRKN NLTTRVLARP PPMSSSATSS ESSSTSQSPV PFSGSFLEEG GYYRKPSYMS  60
   61 LTQSIKAKQR RSGSSSSCSK TPFEKKQSMS YNGDVNVRRS AGSDPLNNQW TDLYPPAQVT 120
  121 GRHMWAKSQR G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle