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View Structure Prediction Details

Protein: gi|67633752, gi|...
Organism: Arabidopsis thaliana
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|67633752, gi|....

Description E-value Query
Range
Subject
Range
gi|22003996 - gi|22003996|dbj|BAC06447.1| chitinase [Haemaphysalis longicornis]
317.0 [0..1] [332..31]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTVILGSP SAEVKASYWF PDGETQDPIT SAETIPSALF THLFCAFADL DANSHKVFVS  60
   61 QAHEFIFSTF TETVKIRNPQ VKTLLSIGGK NANNSAFASM ASNHQSRKTF IDSWIFIARS 120
  121 NGFHGLDLAW EYPYSDHEMT DFGNLVGELR AAVEAESRRS SKPTLLLTAA VYYSSVYKTF 180
  181 TYPVQVMRES LDWVNIIAYD FYGPVSSSKF TVPTAGLHVS SNNEGPSGDS GLKQWIKDGL 240
  241 PEKKAVLGFS YVGWAWTLQN DKDTGYNAAA AGVAKSEDDV SEDGSINYAQ INKFIRDEEA 300
  301 AKVYDPKVVG HYCFAKKIWI GYEDTQSVEA KV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.221849
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle