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View Structure Prediction Details

Protein: gi|5541705, gi|7...
Organism: Arabidopsis thaliana
Length: 202 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5541705, gi|7....

Description E-value Query
Range
Subject
Range
gi|21618088 - gi|21618088|gb|AAM67138.1| ripening-related protein-like [Arabidopsis thaliana]
177.0 [0..1] [202..1]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQIFYTLF LFLLSTAILT ASSSAPRAAI TSKRAINFIQ ASCKATTYPT VCVNSLTGYA  60
   61 NSIQTSPRRL AETALNVTVT QAQSTKVFVW RLGRFTSLKK REIQAVKDCI EEIHDAVDRL 120
  121 TMSIHEVKMC GSAKGRDQFW FHMSNAQTWT SAALTNANTC SDGFAGRVMD GRVKNSVRAR 180
  181 ILNLGRGTSN ALALINAFAK KY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.0
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle