YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ZCIS_ARATH
Organism: Arabidopsis thaliana
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZCIS_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554297 - gi|21554297|gb|AAM63372.1| unknown [Arabidopsis thaliana]
478.0 [0..1] [367..1]

Back

Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVYHLLLSS PPSLLLLPPS PRRPNLTLIR RIPAHPRLGN STSLLSSSSP VIRKILVRST  60
   61 LREDQPIASD SESSPTLLIG EDSAAFELGK QKLVSWVYFG VVLGVVLFIL NVVWIDNSTG 120
  121 FGKSFIDAVS NIS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [134-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSPEVAMLML ILIFAIVHSG LASLRDIGEK LIGERAFRVL FAGISLPLAM STIVYFINHR  60
   61 YDGSQLWQLQ GVPGVHEAIW VANFVSFFFL YPSTFNLLEV AAVDKPKMHL WETGIMRITR 120
  121 HPQMVGQIVW CLAHTLWIGN TVAASASLGL IAHHLFGAWN GDRRLAKRYG EDFESIKKRT 180
  181 SVIPFAAIFE GRQVLPEDYY KEFVRLPYLA ITALTVGAYF AHPLMQGASF RLHW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle