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View Structure Prediction Details

Protein: FB237_ARATH
Organism: Arabidopsis thaliana
Length: 380 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FB237_ARATH.

Description E-value Query
Range
Subject
Range
FB285_ARATH - F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1
510.0 [0..1] [380..1]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIILRSSDP LLSRIHPEPQ EIDHFDNLPD SILLLIFNNI GDVKALGRCS VVSKRFHSLI  60
   61 PQVENVFVRV DCVISDDDSS SLLSDKPRSA SAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPFSAIFRLV FKPLQALGQF LKRSGSSSLP SGSSPSSLLI SGGDDGEIEQ GGVTHHSPTQ  60
   61 VLKNFDEIKF LKIELPS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [171-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GELGIDDGVL LKWRAEFGST LENCVILGAS SVIPPTNSDK TEASSAPVAA VEDNGSIPES  60
   61 FYTNGGLKLR VVWTISSLIA ASARHYLLQP IIAEHKTLDS LVLTDVDGQG VLCMNRDQLE 120
  121 ELRVKPLSAS SASKRTLVPA LNMRLWYAPS LELPDGTVLK GATLVAIRPS ESKKEVCDVS 180
  181 WVSSAFDEPY GVAAKMLVKR RTYCLEMNSF 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle