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View Structure Prediction Details

Protein: gi|12323289, gi|...
Organism: Arabidopsis thaliana
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12323289, gi|....

Description E-value Query
Range
Subject
Range
gi|42572843 - gi|42572843|ref|NP_974518.1| ORP1C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C); oxysterol b...
180.0 [0..6] [261..36]

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Predicted Domain #1
Region A:
Residues: [1-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPLAAKSN LTTTRSASLN IPHSTRTNHN HDLRYSLSAG PRTNEDRPAS GNGVAGILYK  60
   61 WVNYGQGWKR RWFVLQDGVL SYYRIHGPDK ISLSVEMDRR SKLIGGESLR FICRHSKRGD 120
  121 VHSPGKPLGQ IHLKVSSIGQ SISDGKRFTV FTGTKSLHLR AATSEDRASW IEALKAVKET 180
  181 FPRMSNEELM ASTTNVSVST DKLRQRLMEE EVDETIIKDC EDIMKNNFLA LHDEVMSLKR 240
  241 YQYHLIDSLK NVSNSPIRPS NQSFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.221849
Match: 2j59M
Description: No description for 2j59M was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle