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View Structure Prediction Details

Protein: gi|13569550, gi|...
Organism: Arabidopsis thaliana
Length: 225 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13569550, gi|....

Description E-value Query
Range
Subject
Range
gi|30267793, gi|... - gi|50058831|gb|AAT69160.1| hypothetical protein At2g15130 [Arabidopsis thaliana], gi|4585916|gb|AAD2...
391.0 [0..1] [225..1]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFHKIFFVI SLMLVVSLVN AVDYSVVDNS GDSTGGRRFR GEIGGISYGT QTLRSATDFV  60
   61 WRLFQQTNPS DRKSVTKITL FMENGDGVAY NSANEIHFNV GYLAGVSGDV KREFTGVVYH 120
  121 EVVHSWQWNG AGRAPGGLIE GIADYVRLKA GYAPSHWVGP GRGDRWDQGY DVTARFLDYC 180
  181 NGLRNGFVAE LNKKMRNGYS DGFFVDLLGK DVNQLWREYK AKYGQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.23
Match: 1z1wA
Description: Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle