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View Structure Prediction Details

Protein: PR1A1_ARATH
Organism: Arabidopsis thaliana
Length: 209 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PR1A1_ARATH.

Description E-value Query
Range
Subject
Range
gi|115464249, gi... - gi|115464249|ref|NP_001055724.1| Os05g0455600 [Oryza sativa (japonica cultivar-group)], gi|113579275...
238.0 [0..1] [209..83]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWGNVTVDD LFDALREVDW SSPPRPPSEF FSRFTVPKSV PKWDSRLKCN LYYYRTNYFI  60
   61 MIVVILGLGV LTRPLAIFAA LLTALSLAFL NDSFAGSFSE KATRTVRRFS PQLAAKMRPP 120
  121 LTPVTRGRPS SKRAIHVCGQ PRWVFVLTCS LVSFALWYIS SGLLRVSVAL LIAHLATILH 180
  181 ASLRTPNLKA RFNTFREEFR AVWRNYSEI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 59.958607
Match: PF03208.10
Description: No description for PF03208.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle