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View Structure Prediction Details

Protein: gi|7487316, gi|1...
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7487316, gi|1....

Description E-value Query
Range
Subject
Range
gi|47496868, gi|... - gi|50908051|ref|XP_465514.1| tyrosine-specific protein phosphatase-like [Oryza sativa (japonica cult...
458.0 [0..4] [379..34]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAATTKLAR ALQQRRTFVN ARVKWVSDHY LDEAVQREKN LKQVISLKDR IVSSPSKSLP  60
   61 LSSLSLLKPL VNLHITAAAF FQKYPSVFTT FQPSPSHPLH VRLTPQALTL HKEEETIHLS 120
  121 PPQRNVTVQR LTKFLMLTGA GSLPLYVLDR FRFDLGLPRD YITSLIGDYP EYFEVT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EIKDRLTGEK TLALTISSRR NNLPVSEMER REATIDGSRV KKGLRIRYSM NFPKGYELHK  60
   61 RVKNWVEQWQ NLPYISPYEN AFHLGSYSDQ AEKWAVAVLH ELLFLLVSKK TETDNVICLG 120
  121 EYLGFGMRFK KALVHHPGIF YMSHKIRTQT VVLREAYHKV FLLEKHPLMG IRHQYIYLMS 180
  181 KSGRGKKRDY VHGVERSNRK KRVIKACEDG EIYAHNSSL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle